STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljor_1193Leucine-rich repeat-containing protein (substrate of the Dot/Icm secretion system). (828 aa)    
Predicted Functional Partners:
Ljor_1165
Putative CoA-dependent acyltransferase.
  
 
  0.794
Ljor_2114
Hypothetical protein.
  
     0.747
iraA
Small-molecule methyltransferase IraA.
  
     0.739
Ljor_0685
Ankyrin repeats (3 copies).
  
     0.736
Ljor_2326
Protein kinase.
  
    0.734
Ljor_2531
Hypothetical protein.
  
     0.734
Ljor_0608
Hypothetical protein.
  
 
   0.718
lvrA3
Vir region protein.
  
     0.665
yjeA
Endo-1,4-beta-xylanase-like protein.
  
 
  0.662
TolC_2
Outer membrane efflux protein.
  
     0.646
Your Current Organism:
Legionella jordanis
NCBI taxonomy Id: 456
Other names: ATCC 33623, CCUG 16413, CIP 105268, DSM 19212, L. jordanis, NCTC 11533, strain BL 540, strain BL-540
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.