STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YhiI_1Hemolysin D. (415 aa)    
Predicted Functional Partners:
ApxIB_2
ABC transporter.
 
 
 0.974
SunT
Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
 
 0.972
ApxIB_1
ABC transporter.
 
 
 0.738
MacB_1
ABC transporter permease.
  
  
 0.582
TolC_1
Outer membrane protein TolC.
  
 
 0.574
helC
HelC protein.
  
 
 0.509
MdtP
Outer membrane efflux lipoprotein.
  
 
 0.509
OprM
Outer membrane efflux protein.
  
 
 0.509
Ljor_1601
Hypothetical protein.
       0.497
TolC_2
Outer membrane efflux protein.
  
   0.488
Your Current Organism:
Legionella jordanis
NCBI taxonomy Id: 456
Other names: ATCC 33623, CCUG 16413, CIP 105268, DSM 19212, L. jordanis, NCTC 11533, strain BL 540, strain BL-540
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.