STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trbJConjugal transfer protein TrbJ. (246 aa)    
Predicted Functional Partners:
trbG
Conjugal transfer protein TrbG.
 
  
 0.995
trbL
Conjugal transfer protein TrbL.
 
  
 0.994
trbI
Conjugal transfer protein TrbI.
 
  
 0.994
trbF
Conjugal transfer protein TrbF.
 
  
 0.994
trbE
Conjugal transfer protein TrbE.
 
  
 0.994
trbD
Conjugal transfer protein TrbD.
 
  
 0.994
virB11
Conjugal transfer ATPase TrbB.
 
  
 0.991
trbC
Conjugal transfer protein TrbC.
    
 0.980
traC
DNA primase TraC.
 
     0.940
traF
Conjugal transfer peptidase TraF.
 
     0.934
Your Current Organism:
Legionella jordanis
NCBI taxonomy Id: 456
Other names: ATCC 33623, CCUG 16413, CIP 105268, DSM 19212, L. jordanis, NCTC 11533, strain BL 540, strain BL-540
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.