STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ttg2B_2ABC transporter permease. (374 aa)    
Predicted Functional Partners:
Ttg2A_2
ABC transporter ATP binding protein.
 
 0.998
Ljor_1785
ABC transport system periplasmic substrate binding protein.
 
 0.994
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
 
 0.987
ttg2A
Toluene tolerance ABC transporter ATP binding protein Ttg2A.
 
 0.986
ttg2B
Toluene tolerance protein Ttg2B.
  
  
 
0.923
ttg2D
Toluene tolerance protein Ttg2D.
 
 
 0.872
Ljor_0635
Anti-anti-sigma factor.
  
 0.861
Ljor_1786
Transport protein.
 
    0.835
Ljor_2609
Putative transmembrane protein.
  
 
 0.646
pal
Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL); Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
   
 0.642
Your Current Organism:
Legionella jordanis
NCBI taxonomy Id: 456
Other names: ATCC 33623, CCUG 16413, CIP 105268, DSM 19212, L. jordanis, NCTC 11533, strain BL 540, strain BL-540
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.