STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljor_1986Ankyrin 3. (626 aa)    
Predicted Functional Partners:
Ljor_2784
Interaptin.
  
     0.774
Ljor_2786
Hypothetical protein.
  
     0.759
Ljor_0651
Ankyrin repeats (3 copies).
  
     0.732
Ljor_2785
Ankyrin repeats (3 copies).
  
     0.655
Ljor_0042
Rho GTPase (Miro-like).
  
  0.582
Arp_2
Ankyrin repeat domain-containing protein.
  
     0.569
Ljor_1665
Rho GTPase (Miro-like).
  
  0.501
apaH
Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.496
LgrD
Saframycin Mx1 synthetase B.
  
 0.481
Ljor_0350
Rho GTPase (Miro-like).
  
  0.478
Your Current Organism:
Legionella jordanis
NCBI taxonomy Id: 456
Other names: ATCC 33623, CCUG 16413, CIP 105268, DSM 19212, L. jordanis, NCTC 11533, strain BL 540, strain BL-540
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.