STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljor_2003EcoKI restriction-modification system protein HsdS. (224 aa)    
Predicted Functional Partners:
Ljor_2004
Putative type I restriction enzyme M protein.
 
 
 0.998
HsdR
Putative type I restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.991
hsdS
Type-1 restriction enzyme EcoKI specificity protein.
 
     0.952
Ljor_2009
Zinc metalloprotease.
 
     0.939
Ljor_2007
ATP-dependent DNA helicase.
 
    0.925
Ljor_1211
Hypothetical protein.
  
 
 0.905
Ljor_2006
Hypothetical protein.
       0.786
Ljor_0312
Zinc metalloprotease.
 
     0.634
Ljor_2002
Hypothetical protein.
       0.561
Your Current Organism:
Legionella jordanis
NCBI taxonomy Id: 456
Other names: ATCC 33623, CCUG 16413, CIP 105268, DSM 19212, L. jordanis, NCTC 11533, strain BL 540, strain BL-540
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