STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IciALysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (294 aa)    
Predicted Functional Partners:
ArgO
LysE family transporter.
 
   
 0.920
fadH
2,4-dienoyl-CoA reductase FadH1.
 
 
 
 0.622
ydcO
Inner membrane protein YdcO.
  
     0.508
cycA
Cytochrome c.
     
 0.458
Cph2_3
Regulatory protein (GGDEF and EAL domains).
   
  
 0.441
Gmr_3
GGDEF domain-containing sensory box protein.
   
  
 0.441
epsL
Putative sugar transferase EpsL.
     
 0.440
ArcB_4
Sensory histidine-kinase / response regulator.
   
  
 0.431
ArcB_2
Sensory histidine-kinase / response regulator.
   
  
 0.431
BvgS
Sensory box histidine kinase/response regulator.
   
  
 0.431
Your Current Organism:
Legionella jordanis
NCBI taxonomy Id: 456
Other names: ATCC 33623, CCUG 16413, CIP 105268, DSM 19212, L. jordanis, NCTC 11533, strain BL 540, strain BL-540
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.