Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ljor_0257 | Ljor_0593 | Ljor_0257 | Ljor_0593 | TraX protein. | Putative asmA protein. | 0.756 |
Ljor_0257 | Ljor_0670 | Ljor_0257 | Ljor_0670 | TraX protein. | Thaumatin domain-containing protein. | 0.728 |
Ljor_0257 | Ljor_0879 | Ljor_0257 | Ljor_0879 | TraX protein. | RasGEF domain protein. | 0.755 |
Ljor_0257 | Ljor_1867 | Ljor_0257 | Ljor_1867 | TraX protein. | Two component response regulator. | 0.725 |
Ljor_0257 | Ljor_2293 | Ljor_0257 | Ljor_2293 | TraX protein. | ABC transporter substrate binding protein. | 0.744 |
Ljor_0257 | Ljor_2367 | Ljor_0257 | Ljor_2367 | TraX protein. | PAP2 superfamily protein. | 0.594 |
Ljor_0257 | Ljor_2463 | Ljor_0257 | Ljor_2463 | TraX protein. | Interaptin. | 0.771 |
Ljor_0257 | Ljor_2539 | Ljor_0257 | Ljor_2539 | TraX protein. | Flagellar hook-length control protein FliK. | 0.754 |
Ljor_0257 | mutT_1 | Ljor_0257 | Ljor_1141 | TraX protein. | 8-oxo-dGTP diphosphatase. | 0.743 |
Ljor_0257 | ybhI | Ljor_0257 | Ljor_2292 | TraX protein. | Inner membrane protein YbhI. | 0.726 |
Ljor_0593 | Ljor_0257 | Ljor_0593 | Ljor_0257 | Putative asmA protein. | TraX protein. | 0.756 |
Ljor_0593 | Ljor_0670 | Ljor_0593 | Ljor_0670 | Putative asmA protein. | Thaumatin domain-containing protein. | 0.732 |
Ljor_0593 | Ljor_0879 | Ljor_0593 | Ljor_0879 | Putative asmA protein. | RasGEF domain protein. | 0.765 |
Ljor_0593 | Ljor_1867 | Ljor_0593 | Ljor_1867 | Putative asmA protein. | Two component response regulator. | 0.724 |
Ljor_0593 | Ljor_2293 | Ljor_0593 | Ljor_2293 | Putative asmA protein. | ABC transporter substrate binding protein. | 0.758 |
Ljor_0593 | Ljor_2367 | Ljor_0593 | Ljor_2367 | Putative asmA protein. | PAP2 superfamily protein. | 0.622 |
Ljor_0593 | Ljor_2463 | Ljor_0593 | Ljor_2463 | Putative asmA protein. | Interaptin. | 0.773 |
Ljor_0593 | Ljor_2539 | Ljor_0593 | Ljor_2539 | Putative asmA protein. | Flagellar hook-length control protein FliK. | 0.769 |
Ljor_0593 | mutT_1 | Ljor_0593 | Ljor_1141 | Putative asmA protein. | 8-oxo-dGTP diphosphatase. | 0.746 |
Ljor_0593 | ybhI | Ljor_0593 | Ljor_2292 | Putative asmA protein. | Inner membrane protein YbhI. | 0.693 |
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