Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ljor_2613 | Ljor_2614 | Ljor_2613 | Ljor_2614 | Hypothetical protein. | ATP dependent DNA ligase. | 0.570 |
Ljor_2613 | Ljor_2615 | Ljor_2613 | Ljor_2615 | Hypothetical protein. | Beta-lactamase superfamily domain protein. | 0.570 |
Ljor_2613 | Ljor_2616 | Ljor_2613 | Ljor_2616 | Hypothetical protein. | Hypothetical protein. | 0.493 |
Ljor_2614 | Ljor_2613 | Ljor_2614 | Ljor_2613 | ATP dependent DNA ligase. | Hypothetical protein. | 0.570 |
Ljor_2614 | Ljor_2615 | Ljor_2614 | Ljor_2615 | ATP dependent DNA ligase. | Beta-lactamase superfamily domain protein. | 0.990 |
Ljor_2614 | Ljor_2616 | Ljor_2614 | Ljor_2616 | ATP dependent DNA ligase. | Hypothetical protein. | 0.661 |
Ljor_2614 | Ljor_2618 | Ljor_2614 | Ljor_2618 | ATP dependent DNA ligase. | Hypothetical protein. | 0.421 |
Ljor_2614 | polX | Ljor_2614 | Ljor_2617 | ATP dependent DNA ligase. | DNA polymerase/3'-5' exonuclease PolX. | 0.858 |
Ljor_2615 | Ljor_2613 | Ljor_2615 | Ljor_2613 | Beta-lactamase superfamily domain protein. | Hypothetical protein. | 0.570 |
Ljor_2615 | Ljor_2614 | Ljor_2615 | Ljor_2614 | Beta-lactamase superfamily domain protein. | ATP dependent DNA ligase. | 0.990 |
Ljor_2615 | Ljor_2616 | Ljor_2615 | Ljor_2616 | Beta-lactamase superfamily domain protein. | Hypothetical protein. | 0.661 |
Ljor_2615 | Ljor_2618 | Ljor_2615 | Ljor_2618 | Beta-lactamase superfamily domain protein. | Hypothetical protein. | 0.421 |
Ljor_2615 | polX | Ljor_2615 | Ljor_2617 | Beta-lactamase superfamily domain protein. | DNA polymerase/3'-5' exonuclease PolX. | 0.709 |
Ljor_2616 | Ljor_2613 | Ljor_2616 | Ljor_2613 | Hypothetical protein. | Hypothetical protein. | 0.493 |
Ljor_2616 | Ljor_2614 | Ljor_2616 | Ljor_2614 | Hypothetical protein. | ATP dependent DNA ligase. | 0.661 |
Ljor_2616 | Ljor_2615 | Ljor_2616 | Ljor_2615 | Hypothetical protein. | Beta-lactamase superfamily domain protein. | 0.661 |
Ljor_2616 | Ljor_2618 | Ljor_2616 | Ljor_2618 | Hypothetical protein. | Hypothetical protein. | 0.482 |
Ljor_2616 | polX | Ljor_2616 | Ljor_2617 | Hypothetical protein. | DNA polymerase/3'-5' exonuclease PolX. | 0.581 |
Ljor_2618 | Ljor_2614 | Ljor_2618 | Ljor_2614 | Hypothetical protein. | ATP dependent DNA ligase. | 0.421 |
Ljor_2618 | Ljor_2615 | Ljor_2618 | Ljor_2615 | Hypothetical protein. | Beta-lactamase superfamily domain protein. | 0.421 |
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