Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CtaA | Ljor_2637 | Ljor_2640 | Ljor_2637 | Cytochrome c oxidase assembly protein. | Hypothetical protein. | 0.848 |
CtaA | Ljor_2638 | Ljor_2640 | Ljor_2638 | Cytochrome c oxidase assembly protein. | SURF1 family protein. | 0.990 |
CtaA | Ljor_2639 | Ljor_2640 | Ljor_2639 | Cytochrome c oxidase assembly protein. | Hypothetical protein. | 0.929 |
CtaA | cyoE | Ljor_2640 | Ljor_2641 | Cytochrome c oxidase assembly protein. | Polyprenyltransferase (cytochrome oxidase assembly factor); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.999 |
CtaA | yfcG | Ljor_2640 | Ljor_2636 | Cytochrome c oxidase assembly protein. | S-transferase; Belongs to the GST superfamily. | 0.546 |
Ljor_2635 | yfcG | Ljor_2635 | Ljor_2636 | Hypothetical protein. | S-transferase; Belongs to the GST superfamily. | 0.497 |
Ljor_2637 | CtaA | Ljor_2637 | Ljor_2640 | Hypothetical protein. | Cytochrome c oxidase assembly protein. | 0.848 |
Ljor_2637 | Ljor_2638 | Ljor_2637 | Ljor_2638 | Hypothetical protein. | SURF1 family protein. | 0.849 |
Ljor_2637 | Ljor_2639 | Ljor_2637 | Ljor_2639 | Hypothetical protein. | Hypothetical protein. | 0.738 |
Ljor_2637 | cyoE | Ljor_2637 | Ljor_2641 | Hypothetical protein. | Polyprenyltransferase (cytochrome oxidase assembly factor); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.745 |
Ljor_2637 | yfcG | Ljor_2637 | Ljor_2636 | Hypothetical protein. | S-transferase; Belongs to the GST superfamily. | 0.661 |
Ljor_2638 | CtaA | Ljor_2638 | Ljor_2640 | SURF1 family protein. | Cytochrome c oxidase assembly protein. | 0.990 |
Ljor_2638 | Ljor_2637 | Ljor_2638 | Ljor_2637 | SURF1 family protein. | Hypothetical protein. | 0.849 |
Ljor_2638 | Ljor_2639 | Ljor_2638 | Ljor_2639 | SURF1 family protein. | Hypothetical protein. | 0.907 |
Ljor_2638 | cyoE | Ljor_2638 | Ljor_2641 | SURF1 family protein. | Polyprenyltransferase (cytochrome oxidase assembly factor); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.973 |
Ljor_2638 | yfcG | Ljor_2638 | Ljor_2636 | SURF1 family protein. | S-transferase; Belongs to the GST superfamily. | 0.542 |
Ljor_2639 | CtaA | Ljor_2639 | Ljor_2640 | Hypothetical protein. | Cytochrome c oxidase assembly protein. | 0.929 |
Ljor_2639 | Ljor_2637 | Ljor_2639 | Ljor_2637 | Hypothetical protein. | Hypothetical protein. | 0.738 |
Ljor_2639 | Ljor_2638 | Ljor_2639 | Ljor_2638 | Hypothetical protein. | SURF1 family protein. | 0.907 |
Ljor_2639 | cyoE | Ljor_2639 | Ljor_2641 | Hypothetical protein. | Polyprenyltransferase (cytochrome oxidase assembly factor); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.869 |
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