B9G98_00581 protein (Wickerhamiella sorbophila)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B9G98_00581

MAP kinase kinase kinase wis4. (1272 aa)

Predicted Functional Partners:

B9G98_00508

0.977

B9G98_04137

0.973

B9G98_03718

0.796

B9G98_03875

0.796

B9G98_04009

0.782

B9G98_03627

0.779

B9G98_04526

0.732

B9G98_03527

0.670

B9G98_00874

0.667

B9G98_00911

0.651

Your Current Organism:

Wickerhamiella sorbophila

NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B9G98_00508	B9G98_00581	A0A2T0FD06	A0A2T0FDA7	Oxidative stress response two-component system protein SSK1.	MAP kinase kinase kinase wis4.	0.977
B9G98_00508	B9G98_00911	A0A2T0FD06	A0A2T0FE79	Oxidative stress response two-component system protein SSK1.	Two-component system protein B.	0.588
B9G98_00508	B9G98_03627	A0A2T0FD06	A0A2T0FM08	Oxidative stress response two-component system protein SSK1.	Dual specificity protein kinase FUZ7; Belongs to the protein kinase superfamily.	0.455
B9G98_00508	B9G98_03718	A0A2T0FD06	A0A2T0FM83	Oxidative stress response two-component system protein SSK1.	Serine/threonine-protein kinase BCK1/SLK1/SSP31.	0.549
B9G98_00508	B9G98_03875	A0A2T0FD06	A0A2T0FMQ9	Oxidative stress response two-component system protein SSK1.	Protein kinase byr2.	0.688
B9G98_00508	B9G98_04009	A0A2T0FD06	A0A2T0FN49	Oxidative stress response two-component system protein SSK1.	MAP kinase kinase MKK2/SSP33; Belongs to the protein kinase superfamily.	0.427
B9G98_00508	B9G98_04137	A0A2T0FD06	A0A2T0FNG0	Oxidative stress response two-component system protein SSK1.	MAP kinase kinase PBS2.	0.673
B9G98_00508	B9G98_04526	A0A2T0FD06	A0A2T0FPJ4	Oxidative stress response two-component system protein SSK1.	Transcription factor prr1.	0.723
B9G98_00581	B9G98_00508	A0A2T0FDA7	A0A2T0FD06	MAP kinase kinase kinase wis4.	Oxidative stress response two-component system protein SSK1.	0.977
B9G98_00581	B9G98_00874	A0A2T0FDA7	A0A2T0FE29	MAP kinase kinase kinase wis4.	Histidine protein kinase NIK1.	0.667
B9G98_00581	B9G98_00911	A0A2T0FDA7	A0A2T0FE79	MAP kinase kinase kinase wis4.	Two-component system protein B.	0.651
B9G98_00581	B9G98_03527	A0A2T0FDA7	A0A2T0FLR1	MAP kinase kinase kinase wis4.	Protein GIR2.	0.670
B9G98_00581	B9G98_03627	A0A2T0FDA7	A0A2T0FM08	MAP kinase kinase kinase wis4.	Dual specificity protein kinase FUZ7; Belongs to the protein kinase superfamily.	0.779
B9G98_00581	B9G98_03718	A0A2T0FDA7	A0A2T0FM83	MAP kinase kinase kinase wis4.	Serine/threonine-protein kinase BCK1/SLK1/SSP31.	0.796
B9G98_00581	B9G98_03875	A0A2T0FDA7	A0A2T0FMQ9	MAP kinase kinase kinase wis4.	Protein kinase byr2.	0.796
B9G98_00581	B9G98_04009	A0A2T0FDA7	A0A2T0FN49	MAP kinase kinase kinase wis4.	MAP kinase kinase MKK2/SSP33; Belongs to the protein kinase superfamily.	0.782
B9G98_00581	B9G98_04137	A0A2T0FDA7	A0A2T0FNG0	MAP kinase kinase kinase wis4.	MAP kinase kinase PBS2.	0.973
B9G98_00581	B9G98_04526	A0A2T0FDA7	A0A2T0FPJ4	MAP kinase kinase kinase wis4.	Transcription factor prr1.	0.732
B9G98_00874	B9G98_00581	A0A2T0FE29	A0A2T0FDA7	Histidine protein kinase NIK1.	MAP kinase kinase kinase wis4.	0.667
B9G98_00874	B9G98_04526	A0A2T0FE29	A0A2T0FPJ4	Histidine protein kinase NIK1.	Transcription factor prr1.	0.553

page 1 of 4

Server load: low (24%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2024

Credits

Access

Info

About