STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_00609Threonine--tRNA ligase, cytoplasmic. (702 aa)    
Predicted Functional Partners:
B9G98_03219
Threonine--tRNA ligase, mitochondrial.
  
  
 
0.761
ALA1
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 
 0.693
B9G98_02611
Lysine--tRNA ligase.
  
 
 0.664
B9G98_03302
Leucine--tRNA ligase, cytoplasmic.
  
 
 0.662
B9G98_01537
Eukaryotic translation initiation factor 5B.
  
 0.651
B9G98_03477
Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.645
B9G98_00947
Translation initiation factor IF-2, mitochondrial.
  
 0.625
B9G98_01320
Histidine--tRNA ligase, mitochondrial.
  
 
 0.624
B9G98_00816
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.616
B9G98_04533
54S ribosomal protein L10, mitochondrial.
   
 
 0.610
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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