STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_00767E3 ubiquitin-protein ligase HRD1. (296 aa)    
Predicted Functional Partners:
B9G98_02048
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.935
B9G98_03767
Protein OS-9.
   
 0.933
B9G98_03535
Protein sel-1 1.
   
 0.924
B9G98_02036
Cell division control protein 48.
    
 0.917
B9G98_02280
Ubiquitin-conjugating enzyme E2 G2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.831
B9G98_01313
Uncharacterized protein YbeQ.
   
 0.821
B9G98_03539
ATPase family gene 2 protein.
    
 0.818
B9G98_03099
UV excision repair protein rhp23.
    
 0.751
B9G98_03391
Chitin synthase regulatory factor 3.
    
 0.727
B9G98_03400
Chitin synthase regulatory factor 4.
    
 0.727
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.