STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_01082RRM domain-containing protein. (519 aa)    
Predicted Functional Partners:
B9G98_00951
ATP-dependent RNA helicase fal1.
  
 0.917
B9G98_02344
Nucleolar protein 3.
   
 0.879
B9G98_04428
mRNA export factor mex67.
   
 0.873
B9G98_03397
Polyadenylate-binding protein 3.
   
 0.864
B9G98_03899
U1 small nuclear ribonucleoprotein.
   
 
 0.859
B9G98_04377
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.850
B9G98_02811
Splicing factor U2AF subunit.
   
 0.844
B9G98_03354
Uncharacterized protein C11G11.07.
    
 
 0.810
B9G98_02121
Nuclear cap-binding protein complex subunit 1.
   
 0.807
B9G98_00054
Uncharacterized protein.
   
 0.805
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.