STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_0110654S ribosomal protein L34, mitochondrial. (116 aa)    
Predicted Functional Partners:
B9G98_00529
54S ribosomal protein L23, mitochondrial.
   
 
 0.989
B9G98_03928
54S ribosomal protein L51, mitochondrial.
   
 
 0.988
B9G98_04006
54S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
   
 0.988
B9G98_00312
54S ribosomal protein L17, mitochondrial.
   
 
 0.986
B9G98_00920
37S ribosomal protein S28, mitochondrial; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.986
B9G98_02567
54S ribosomal protein L39, mitochondrial.
   
 
 0.986
B9G98_01556
54S ribosomal protein IMG1, mitochondrial.
   
 
 0.985
B9G98_03274
54S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.983
B9G98_04463
54S ribosomal protein L2, mitochondrial.
   
   0.983
B9G98_00577
54S ribosomal protein L27, mitochondrial.
   
 
 0.982
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.