STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_01312Sister chromatid cohesion protein pds5. (988 aa)    
Predicted Functional Partners:
B9G98_02548
N-acetyltransferase eso1.
    
 0.997
B9G98_04729
Double-strand-break repair protein rad21-like protein 1.
   
 0.994
B9G98_01055
Structural maintenance of chromosomes protein.
   
 0.986
B9G98_01190
Structural maintenance of chromosomes protein.
   
 0.983
B9G98_01149
Cohesin subunit psc3.
   
 0.982
B9G98_03739
Sister chromatid cohesion protein.
   
 0.945
B9G98_00695
Structural maintenance of chromosomes protein 5.
   
 0.871
B9G98_01040
Structural maintenance of chromosomes protein.
   
 0.861
B9G98_02667
Structural maintenance of chromosomes protein 6.
   
 0.845
B9G98_01147
Structural maintenance of chromosomes protein 2.
   
 0.795
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.