STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_01604U3 small nucleolar RNA-associated protein 20. (2380 aa)    
Predicted Functional Partners:
B9G98_00152
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.999
B9G98_00185
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.999
B9G98_00276
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.999
B9G98_00373
U3 small nucleolar RNA-associated protein 10.
   
 0.999
B9G98_01023
Protein SOF1.
   
  0.999
B9G98_01293
rRNA-processing protein FCF1.
   
 0.999
B9G98_01454
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.999
B9G98_01594
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
 0.999
B9G98_01661
Something about silencing protein 10.
   
 0.999
B9G98_01667
U3 small nucleolar RNA-associated protein 7.
   
 0.999
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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