STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_0162960S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)    
Predicted Functional Partners:
B9G98_01431
60S ribosomal protein L25-B; Belongs to the universal ribosomal protein uL23 family.
  
 0.995
B9G98_03629
Elongation factor 3.
   
   0.987
B9G98_04418
[NU+] prion formation protein 1.
   
   0.987
B9G98_03832
40S ribosomal protein S28.
   
 
 0.985
B9G98_01122
60S ribosomal protein L26-A.
   
 0.983
B9G98_03015
60S ribosomal protein L31.
   
 0.983
B9G98_00445
60S ribosomal protein L32.
   
 0.982
B9G98_01470
60S ribosomal protein L14-A.
   
 0.982
B9G98_01962
60S ribosomal protein L24.
   
 0.982
B9G98_00641
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.981
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.