STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_01768Alkyl transferase; Belongs to the UPP synthase family. (254 aa)    
Predicted Functional Partners:
B9G98_02172
Dehydrodolichyl diphosphate synthase complex subunit nus1.
 
 
 0.945
B9G98_00694
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.861
B9G98_03988
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 
0.813
B9G98_01767
Putative hexaprenyl pyrophosphate synthase, mitochondrial; Belongs to the FPP/GGPP synthase family.
  
 
 0.812
B9G98_02461
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.811
B9G98_00439
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
     
 0.802
B9G98_02329
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
     
 0.802
B9G98_03620
Squalene synthase.
     
 0.769
B9G98_03227
Cytochrome b2, mitochondrial.
    
 0.731
B9G98_04542
Dolichyldiphosphatase.
    
 0.701
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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