STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_01972E3 ubiquitin-protein ligase. (798 aa)    
Predicted Functional Partners:
B9G98_03124
PX domain-containing protein YPT35.
    
 0.996
B9G98_03397
Polyadenylate-binding protein 3.
 
  
   0.908
B9G98_00528
26S proteasome non-ATPase regulatory subunit 4.
    
 0.900
B9G98_01923
RNA polymerase I-specific transcription initiation factor rrn7.
    
 0.888
B9G98_00644
TEA domain-containing protein.
    
 0.887
B9G98_04638
AN1-type zinc finger protein TMC1.
    
 0.886
B9G98_01480
Ubiquitin-conjugating enzyme E2 1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.830
B9G98_04532
Uncharacterized protein C1F12.05.
    
 
 0.827
B9G98_00465
14-3-3 protein epsilon; Belongs to the 14-3-3 family.
    
 0.807
B9G98_00799
DNA damage checkpoint protein rad24; Belongs to the 14-3-3 family.
    
 0.807
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.