STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_02374Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (296 aa)    
Predicted Functional Partners:
B9G98_00130
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
   
 0.861
B9G98_01318
Chromatin modification-related protein EAF6.
    
 0.849
B9G98_00383
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.838
B9G98_01368
NuA3 HAT complex component NTO1.
    
 0.819
B9G98_00738
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
 0.817
B9G98_04050
Enhancer of polycomb-like protein.
    
 0.812
B9G98_02297
SWR1-complex protein 4.
   
 0.807
B9G98_00122
Histone acetyltransferase GCN5.
    
 0.776
B9G98_00597
Histone H3.
    
 0.769
B9G98_03058
Protein AF-9.
    
 0.754
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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