STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_02407Ribosome-interacting GTPase 2. (370 aa)    
Predicted Functional Partners:
B9G98_03527
Protein GIR2.
   
 
 0.989
B9G98_01712
Translation machinery-associated protein 46.
   
 
 0.892
B9G98_00224
eIF-2-alpha kinase activator GCN1.
   
 
 0.889
B9G98_00995
ATP-dependent RNA helicase DBP9.
   
   0.829
B9G98_03629
Elongation factor 3.
   
 
 0.803
B9G98_04418
[NU+] prion formation protein 1.
   
 
 0.751
B9G98_00422
60S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.683
B9G98_00360
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.668
B9G98_01536
Ribosome-interacting GTPase 1.
  
  
0.624
B9G98_03019
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
   0.607
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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