STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_02673Vacuolar morphogenesis protein 7. (297 aa)    
Predicted Functional Partners:
B9G98_03325
Syntaxin-61.
    
 0.848
B9G98_03226
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
     
 0.767
B9G98_04094
t-SNARE VTI1.
     
 0.752
B9G98_00183
Syntaxin PEP12; Belongs to the syntaxin family.
     
 0.520
B9G98_03359
Sorting nexin-3.
     
 0.511
B9G98_01972
E3 ubiquitin-protein ligase.
    
  0.510
B9G98_04330
Bud site selection protein RAX2.
    
  0.510
B9G98_02566
RAD50-interacting protein 1.
   
 
  0.500
B9G98_04682
Protein transport protein use1.
     
 0.493
B9G98_04701
ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.486
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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