STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_03031Pre-mRNA-splicing factor brr2. (1857 aa)    
Predicted Functional Partners:
B9G98_00454
Pre-mRNA-splicing factor spp42.
   
 0.999
B9G98_00697
U5 small nuclear ribonucleoprotein component CLO.
   
 0.999
B9G98_01729
P21-activated protein kinase-interacting protein 1.
   
 0.999
B9G98_02677
Pre-mRNA-splicing factor prp1.
   
 0.997
B9G98_01365
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
 0.995
B9G98_00361
Pre-mRNA-splicing factor rse1.
   
 
 0.993
B9G98_00536
U4/U6.U5 tri-snRNP-associated protein snu66.
   
 0.993
B9G98_01009
Small nuclear ribonucleoprotein F.
   
 0.993
B9G98_00222
Small nuclear ribonucleoprotein-associated protein B.
   
 0.992
B9G98_00404
U4/U6 small nuclear ribonucleoprotein Prp31.
    
 0.992
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.