STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_0350926S proteasome regulatory subunit RPN13. (261 aa)    
Predicted Functional Partners:
B9G98_00528
26S proteasome non-ATPase regulatory subunit 4.
   
 0.997
B9G98_01668
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.997
B9G98_03233
26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.
   
 0.996
B9G98_00435
Putative 26S proteasome regulatory subunit rpn6.
   
 0.995
B9G98_01479
26S protease regulatory subunit 4; Belongs to the AAA ATPase family.
   
 0.995
B9G98_04511
Putative 26S proteasome regulatory subunit rpn9.
   
 0.995
B9G98_01841
26S proteasome regulatory subunit rpn-8.
   
 0.994
B9G98_02845
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.994
B9G98_03300
Putative 26S protease subunit rpt4; Belongs to the AAA ATPase family.
   
 0.994
B9G98_03576
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
 0.994
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.