STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_03722Putative vesicular-fusion protein sec17. (290 aa)    
Predicted Functional Partners:
B9G98_01526
Vesicular-fusion protein SEC18.
   
 0.933
B9G98_04094
t-SNARE VTI1.
    
 0.933
B9G98_01472
Synaptobrevin 1.
    
 0.927
B9G98_02822
Protein transport protein SSO2.
    
 0.920
B9G98_00736
Protein sly1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.917
B9G98_04282
Integral membrane protein sed5.
    
 0.902
B9G98_02246
t-SNARE affecting a late Golgi compartment protein 2; Belongs to the syntaxin family.
    
 0.897
B9G98_04438
Protein transport protein SEC22; Belongs to the synaptobrevin family.
   
 0.866
B9G98_03226
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
    
 0.864
B9G98_02928
Protein transport protein SEC9.
    
 
 0.840
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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