STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_04305Vacuolar protein sorting-associated protein IST1. (227 aa)    
Predicted Functional Partners:
B9G98_01552
Vacuolar protein-sorting-associated protein 46.
    
 
 0.989
B9G98_01736
Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.
   
 0.978
B9G98_00499
Vacuolar protein sorting-associated protein VTA1.
   
 
 0.952
B9G98_04281
Vacuolar-sorting protein SNF7.
    
 0.939
B9G98_01466
DOA4-independent degradation protein 4.
    
 0.918
B9G98_00395
Charged multivesicular body protein 5.
    
 
 0.917
B9G98_03598
Vacuolar protein-sorting-associated protein 24.
    
 0.914
B9G98_00487
Protein SAP1.
    
 0.910
B9G98_01208
Charged multivesicular body protein 6.
    
 0.897
B9G98_03222
SAGA complex subunit spt3.
 
 
    0.889
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.