STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_04556Intermediate cleaving peptidase 55. (444 aa)    
Predicted Functional Partners:
B9G98_02155
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.711
B9G98_04544
N-(5'-phosphoribosyl)anthranilate isomerase.
  
 
 0.687
B9G98_03841
Protein FYV4, mitochondrial.
    
 0.643
ARO1
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
    
  0.627
B9G98_02366
D-amino-acid oxidase.
  
 
 0.616
B9G98_04027
Oxidoreductase TDA3.
  
 
 0.616
B9G98_02296
Urea amidolyase.
  
 
 0.583
B9G98_00954
Mitochondrial intermediate peptidase.
   
 
 0.571
B9G98_03123
Thioredoxin reductase.
    
 0.549
B9G98_00061
Phytanoyl-CoA dioxygenase domain-containing protein 1.
    
 0.543
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.