STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9G98_04624Golgi apparatus membrane protein TVP18. (161 aa)    
Predicted Functional Partners:
B9G98_02076
Nucleoporin NSP1.
    
 
 0.918
B9G98_02234
Nucleoporin NSP1.
    
 
 0.918
B9G98_00273
Nuclear transport factor 2.
 
 
    0.894
B9G98_03196
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.841
B9G98_03638
Mating-type switching protein swi10.
   
 0.833
B9G98_00483
DNA repair protein rad16.
    
 0.832
B9G98_03967
Nuclear protein localization protein 4.
    
 0.822
B9G98_00521
ATP-dependent DNA helicase mph1.
    
 0.812
B9G98_01375
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.775
B9G98_01107
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.737
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.