STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALF60007.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (305 aa)    
Predicted Functional Partners:
ALF60010.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
ALF60009.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.987
ALF60227.1
Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.982
ALF60005.1
Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.969
ALF60008.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.
 
  
 
0.962
ALF60006.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.
 
  
 
0.961
ALF60018.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.931
ALF60017.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.892
ALF60228.1
Polar amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.815
ALF60816.1
Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.809
Your Current Organism:
Psychrobacter urativorans
NCBI taxonomy Id: 45610
Other names: ACAM 534, ATCC 15174, CCUG 4982, CIP 105100, DSM 14009, Micrococcus cryophilus, P. urativorans, Psychrobacter uratovorans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.