STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_1069KEGG: dps:DP1983 glutamine ABC-transporter, permease protein (GlnP); TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component. (232 aa)    
Predicted Functional Partners:
Mvol_1068
KEGG: dvu:DVU0105 glutamine ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 0.999
Mvol_1065
KEGG: lch:Lcho_1148 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor.
 
 0.986
Mvol_0181
Extracellular solute-binding protein family 3; KEGG: dps:DP1559 amino acid ABC transporter, periplasmic substrate-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.
 
 0.947
Mvol_0001
TIGRFAM: DNA-directed RNA polymerase; KEGG: hypothetical protein; K03022 DNA-directed RNA polymerase III subunit C25; PFAM: RNA polymerase Rpb7 domain protein; RNA binding S1 domain protein.
 
      0.900
Mvol_0799
Hypothetical protein; KEGG: dds:Ddes_0576 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
  
 0.606
Mvol_0805
Hypothetical protein; KEGG: cco:CCC13826_1973 riboflavin biosynthesis protein ribAB.
  
  
 0.606
ecfA
Cobalt ABC transporter, ATPase subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 0.597
Mvol_0396
PFAM: protein of unknown function DUF6 transmembrane; KEGG: abu:Abu_1556 hypothetical protein.
  
  
 0.506
Mvol_1177
ABC transporter related protein; KEGG: cco:CCC13826_1257 macrolide export ATP-binding/permease protein MacB; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.462
Mvol_0872
ABC transporter related protein; KEGG: dno:DNO_0872 macrolide-specific ABC-type efflux carrier protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.461
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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