STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Mvol_1237PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: dds:Ddes_1386 rubredoxin-type Fe(Cys)4 protein. (44 aa)    
Predicted Functional Partners:
Mvol_0775
PFAM: Desulfoferrodoxin ferrous iron-binding region; KEGG: gme:Gmet_2613 twin-arginine translocation pathway signal.
  
  
 0.904
Mvol_0336
PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: dol:Dole_2647 rubrerythrin.
 
  
 0.717
Mvol_0736
PFAM: Rubrerythrin; KEGG: ppd:Ppro_3505 rubrerythrin.
  
  
 0.657
Mvol_1278
UbiA prenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
     
 0.558
Mvol_0354
PFAM: Protein of unknown function DUF2193.
  
    0.555
Mvol_0773
KEGG: dde:Dde_1794 hypothetical protein.
  
    0.551
gap
TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; KEGG: ajs:Ajs_2165 glyceraldehyde-3-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase; dihydrodipicolinate reductase.
  
  
 0.527
Mvol_0975
KEGG: dal:Dalk_1642 ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein.
     
 0.511
Mvol_1236
DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that is part of the base excision repair (BER) pathway; protects from oxidative damage by removing the major product of DNA oxidation, 8-oxoguanine (GO), from single- and double- stranded DNA substrates.
       0.510
Mvol_1072
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ecv:APECO1_3640 putative oxidoreductase Fe-S binding subunit.
     
 0.505
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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