STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_1510PFAM: nucleic acid binding OB-fold tRNA/helicase-type. (131 aa)    
Predicted Functional Partners:
Mvol_1509
Hypothetical protein.
  
  
 0.742
Mvol_1508
KEGG: FHA domain protein.
  
  
 0.671
Mvol_1511
KEGG: erg:ERGA_CDS_02520 biotin-protein ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase.
       0.608
Mvol_1512
PFAM: beta-lactamase domain protein; KEGG: dat:HRM2_31220 putative metallo-beta-lactamase family protein.
       0.599
Mvol_0665
PFAM: metallophosphoesterase; KEGG: bxe:Bxe_B0777 putative phosphoesterase.
     
 0.414
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.