STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_1581Uroporphyrinogen-III decarboxylase-like protein; KEGG: geo:Geob_2543 uroporphyrinogen decarboxylase (URO-D). (309 aa)    
Predicted Functional Partners:
Mvol_0806
PFAM: permease; KEGG: pca:Pcar_0353 permease.
  
    0.985
Mvol_1579
PFAM: cobalamin synthesis protein P47K; KEGG: mmw:Mmwyl1_1570 cobalamin synthesis protein P47K.
  
 0.869
Mvol_0396
PFAM: protein of unknown function DUF6 transmembrane; KEGG: abu:Abu_1556 hypothetical protein.
  
  
 0.848
Mvol_1576
PFAM: Uroporphyrinogen decarboxylase (URO-D); KEGG: geo:Geob_2542 uroporphyrinogen decarboxylase (URO-D).
 
  
 0.846
Mvol_1575
PFAM: Uroporphyrinogen decarboxylase (URO-D); KEGG: geo:Geob_2542 uroporphyrinogen decarboxylase (URO-D).
 
  
 0.843
Mvol_1578
PFAM: ferredoxin; KEGG: geo:Geob_2544 ferredoxin.
 
  
 0.814
Mvol_1574
PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: geo:Geob_2541 cobalamin B12-binding domain protein.
 
  
 0.784
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
  
 
 0.708
Mvol_1580
PFAM: major facilitator superfamily MFS_1; KEGG: sfu:Sfum_3925 major facilitator superfamily MFS_1.
  
  
 0.593
Mvol_1124
TIGRFAM: methyl-coenzyme M reductase, beta subunit; PFAM: Methyl-coenzyme M reductase, beta subunit.
     
 0.575
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.