STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_1642TIGRFAM: methanogenesis marker protein 7; PFAM: Protein of unknown function UCP019164. (303 aa)    
Predicted Functional Partners:
Mvol_1632
Hypothetical protein.
  
    0.993
Mvol_1637
Putative signal transduction protein with CBS domains; KEGG: dat:HRM2_21820 putative tRNA nucleotidyl transferase protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein.
  
    0.986
Mvol_1231
TIGRFAM: methanogenesis marker protein 5; PFAM: conserved hypothetical protein.
 
     0.819
Mvol_1709
TIGRFAM: methanogenesis marker protein 6; PFAM: conserved hypothetical protein.
 
     0.816
Mvol_0921
TIGRFAM: methyl coenzyme M reductase system, component A2; PFAM: ABC transporter related; KEGG: sme:SMc01645 putative ABC transporter ATP-binding protein; SMART: AAA ATPase.
 
     0.813
Mvol_1567
TIGRFAM: methanogenesis marker protein 3; Belongs to the UPF0288 family.
 
     0.813
Mvol_1126
TIGRFAM: methyl-coenzyme M reductase I operon protein C; PFAM: Methyl-coenzyme M reductase protein C.
 
     0.788
Mvol_0785
Methanogenesis marker protein 15; KEGG: dal:Dalk_4897 CoA-substrate-specific enzyme activase; TIGRFAM: methanogenesis marker protein 15; CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type.
 
     0.787
Mvol_0167
TIGRFAM: methanogenesis marker protein 17; PFAM: Uncharacterised conserved protein UCP019464, methanogenesis.
 
     0.770
Mvol_1124
TIGRFAM: methyl-coenzyme M reductase, beta subunit; PFAM: Methyl-coenzyme M reductase, beta subunit.
 
     0.763
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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