Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APO89481.1 | APO89689.1 | BJD11_04855 | BJD11_06210 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | GyrI-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.685 |
| APO89687.1 | APO89689.1 | BJD11_06200 | BJD11_06210 | Fructose-2,6-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GyrI-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.472 |
| APO89687.1 | cobS | BJD11_06200 | BJD11_06205 | Fructose-2,6-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.996 |
| APO89687.1 | cobT | BJD11_06200 | BJD11_06195 | Fructose-2,6-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.995 |
| APO89687.1 | cobU | BJD11_06200 | BJD11_06190 | Fructose-2,6-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cobyric acid synthase CobQ; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. | 0.963 |
| APO89689.1 | APO89481.1 | BJD11_06210 | BJD11_04855 | GyrI-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.685 |
| APO89689.1 | APO89687.1 | BJD11_06210 | BJD11_06200 | GyrI-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fructose-2,6-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.472 |
| APO89689.1 | APO91325.1 | BJD11_06210 | BJD11_15945 | GyrI-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.566 |
| APO89689.1 | APO91679.1 | BJD11_06210 | BJD11_18085 | GyrI-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.512 |
| APO89689.1 | BJD11_15590 | BJD11_06210 | BJD11_15590 | GyrI-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidylprolyl isomerase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.430 |
| APO89689.1 | BJD11_15955 | BJD11_06210 | BJD11_15955 | GyrI-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.434 |
| APO89689.1 | BJD11_16450 | BJD11_06210 | BJD11_16450 | GyrI-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Outer protein P; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.460 |
| APO89689.1 | cobS | BJD11_06210 | BJD11_06205 | GyrI-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.473 |
| APO89689.1 | cobT | BJD11_06210 | BJD11_06195 | GyrI-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.474 |
| APO89689.1 | cobU | BJD11_06210 | BJD11_06190 | GyrI-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cobyric acid synthase CobQ; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. | 0.466 |
| APO91325.1 | APO89689.1 | BJD11_15945 | BJD11_06210 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | GyrI-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.566 |
| APO91679.1 | APO89689.1 | BJD11_18085 | BJD11_06210 | Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GyrI-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.512 |
| BJD11_15590 | APO89689.1 | BJD11_15590 | BJD11_06210 | Peptidylprolyl isomerase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | GyrI-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.430 |
| BJD11_15955 | APO89689.1 | BJD11_15955 | BJD11_06210 | Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | GyrI-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.434 |
| BJD11_16450 | APO89689.1 | BJD11_16450 | BJD11_06210 | Outer protein P; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | GyrI-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.460 |
page 1 of 2