STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO93052.1Sugar hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (767 aa)    
Predicted Functional Partners:
APO89782.1
Metal-independent alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.928
nahA
Beta-hexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.756
APO89600.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
 
     0.657
manB-2
Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.655
APO91315.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.638
APO89599.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.578
APO90227.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.573
BJD11_08900
Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.483
bga1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.472
APO91101.1
L-fucose:H+ symporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.464
Your Current Organism:
Xanthomonas euvesicatoria
NCBI taxonomy Id: 456327
Other names: ATCC 11633, Bacterium vesicatorium, DSM 19128, ICMP 109, ICMP 98, NCPPB 2968, X. euvesicatoria, Xanthomonas campestris (pv. vesicatoria), Xanthomonas campestris pv. Vesicatoria type A, Xanthomonas campestris pv. vesicatoria, Xanthomonas euvesicatoria Jones et al. 2006 emend. Constantin et al. 2016
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