STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO91854.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)    
Predicted Functional Partners:
APO89923.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.707
APO91023.1
Polyhydroxyalkanoic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.615
BJD11_15825
Peptidase S1; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.532
APO91855.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
APO92053.1
Lipid kinase YegS; Probably phosphorylates lipids; the in vivo substrate is unknown.
  
   
 0.499
APO90828.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
APO92050.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.483
APO93085.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.467
gndA
6-phosphogluconate dehydrogenase (decarboxylating); Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.438
APO91262.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.436
Your Current Organism:
Xanthomonas euvesicatoria
NCBI taxonomy Id: 456327
Other names: ATCC 11633, Bacterium vesicatorium, DSM 19128, ICMP 109, ICMP 98, NCPPB 2968, X. euvesicatoria, Xanthomonas campestris (pv. vesicatoria), Xanthomonas campestris pv. Vesicatoria type A, Xanthomonas campestris pv. vesicatoria, Xanthomonas euvesicatoria Jones et al. 2006 emend. Constantin et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.