Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXT68612.1 | KXT68647.1 | SCRDD08_01817 | SCRDD08_01852 | Putative histidine kinase. | Sensor-receptor histidine kinase NisK. | 0.539 |
KXT68612.1 | KXT69057.1 | SCRDD08_01817 | SCRDD08_01485 | Putative histidine kinase. | Two-component system histidine kinase. | 0.573 |
KXT68612.1 | KXT69535.1 | SCRDD08_01817 | SCRDD08_01272 | Putative histidine kinase. | Two component system sensor histidine kinase CiaH. | 0.510 |
KXT68612.1 | KXT70507.1 | SCRDD08_01817 | SCRDD08_00591 | Putative histidine kinase. | Two-component response regulator BceR. | 0.846 |
KXT68612.1 | graS | SCRDD08_01817 | SCRDD08_00592 | Putative histidine kinase. | Histidine kinase. | 0.602 |
KXT68647.1 | KXT68612.1 | SCRDD08_01852 | SCRDD08_01817 | Sensor-receptor histidine kinase NisK. | Putative histidine kinase. | 0.539 |
KXT68647.1 | KXT69057.1 | SCRDD08_01852 | SCRDD08_01485 | Sensor-receptor histidine kinase NisK. | Two-component system histidine kinase. | 0.685 |
KXT68647.1 | KXT70507.1 | SCRDD08_01852 | SCRDD08_00591 | Sensor-receptor histidine kinase NisK. | Two-component response regulator BceR. | 0.843 |
KXT68647.1 | graS | SCRDD08_01852 | SCRDD08_00592 | Sensor-receptor histidine kinase NisK. | Histidine kinase. | 0.505 |
KXT69057.1 | KXT68612.1 | SCRDD08_01485 | SCRDD08_01817 | Two-component system histidine kinase. | Putative histidine kinase. | 0.573 |
KXT69057.1 | KXT68647.1 | SCRDD08_01485 | SCRDD08_01852 | Two-component system histidine kinase. | Sensor-receptor histidine kinase NisK. | 0.685 |
KXT69057.1 | KXT70507.1 | SCRDD08_01485 | SCRDD08_00591 | Two-component system histidine kinase. | Two-component response regulator BceR. | 0.813 |
KXT69256.1 | KXT69535.1 | SCRDD08_01441 | SCRDD08_01272 | Two-component sensor kinase SA14-24. | Two component system sensor histidine kinase CiaH. | 0.430 |
KXT69256.1 | KXT70507.1 | SCRDD08_01441 | SCRDD08_00591 | Two-component sensor kinase SA14-24. | Two-component response regulator BceR. | 0.894 |
KXT69535.1 | KXT68612.1 | SCRDD08_01272 | SCRDD08_01817 | Two component system sensor histidine kinase CiaH. | Putative histidine kinase. | 0.510 |
KXT69535.1 | KXT69256.1 | SCRDD08_01272 | SCRDD08_01441 | Two component system sensor histidine kinase CiaH. | Two-component sensor kinase SA14-24. | 0.430 |
KXT69535.1 | KXT70507.1 | SCRDD08_01272 | SCRDD08_00591 | Two component system sensor histidine kinase CiaH. | Two-component response regulator BceR. | 0.799 |
KXT69535.1 | hk02 | SCRDD08_01272 | SCRDD08_01658 | Two component system sensor histidine kinase CiaH. | Two-component sensor kinase SA14-24. | 0.420 |
KXT70507.1 | KXT68612.1 | SCRDD08_00591 | SCRDD08_01817 | Two-component response regulator BceR. | Putative histidine kinase. | 0.846 |
KXT70507.1 | KXT68647.1 | SCRDD08_00591 | SCRDD08_01852 | Two-component response regulator BceR. | Sensor-receptor histidine kinase NisK. | 0.843 |
page 1 of 3