Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXT69924.1 | KXT69926.1 | SCRDD08_00974 | SCRDD08_00976 | Lipopolysaccharide biosynthesis protein. | Glycosyltransferase. | 0.801 |
KXT69924.1 | KXT69927.1 | SCRDD08_00974 | SCRDD08_00977 | Lipopolysaccharide biosynthesis protein. | Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase. | 0.456 |
KXT69924.1 | KXT70222.1 | SCRDD08_00974 | SCRDD08_00772 | Lipopolysaccharide biosynthesis protein. | Accessory secretory protein Asp2. | 0.717 |
KXT69924.1 | KXT70223.1 | SCRDD08_00974 | SCRDD08_00773 | Lipopolysaccharide biosynthesis protein. | Accessory secretory protein Asp3. | 0.720 |
KXT69924.1 | gtfB | SCRDD08_00974 | SCRDD08_00785 | Lipopolysaccharide biosynthesis protein. | Hypothetical protein; Required for polymorphic O-glycosylation of the serine-rich repeat protein in this bacteria. A stabilizing protein that is part of the accessory SecA2/SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. The GtfA-GtfB complex adds GlcNAc from UDP-GlcNAc to the substrate protein, attaching the first sugar residue. Stabilizes the glycosylation activity of GtfA. Has no N-acetylglucosaminyl transferase activity on its own. | 0.719 |
KXT69926.1 | KXT69924.1 | SCRDD08_00976 | SCRDD08_00974 | Glycosyltransferase. | Lipopolysaccharide biosynthesis protein. | 0.801 |
KXT69926.1 | KXT69927.1 | SCRDD08_00976 | SCRDD08_00977 | Glycosyltransferase. | Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase. | 0.558 |
KXT69926.1 | KXT70222.1 | SCRDD08_00976 | SCRDD08_00772 | Glycosyltransferase. | Accessory secretory protein Asp2. | 0.720 |
KXT69926.1 | KXT70223.1 | SCRDD08_00976 | SCRDD08_00773 | Glycosyltransferase. | Accessory secretory protein Asp3. | 0.723 |
KXT69926.1 | gtfB | SCRDD08_00976 | SCRDD08_00785 | Glycosyltransferase. | Hypothetical protein; Required for polymorphic O-glycosylation of the serine-rich repeat protein in this bacteria. A stabilizing protein that is part of the accessory SecA2/SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. The GtfA-GtfB complex adds GlcNAc from UDP-GlcNAc to the substrate protein, attaching the first sugar residue. Stabilizes the glycosylation activity of GtfA. Has no N-acetylglucosaminyl transferase activity on its own. | 0.741 |
KXT69927.1 | KXT69924.1 | SCRDD08_00977 | SCRDD08_00974 | Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase. | Lipopolysaccharide biosynthesis protein. | 0.456 |
KXT69927.1 | KXT69926.1 | SCRDD08_00977 | SCRDD08_00976 | Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase. | Glycosyltransferase. | 0.558 |
KXT69927.1 | KXT70222.1 | SCRDD08_00977 | SCRDD08_00772 | Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase. | Accessory secretory protein Asp2. | 0.717 |
KXT69927.1 | KXT70223.1 | SCRDD08_00977 | SCRDD08_00773 | Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase. | Accessory secretory protein Asp3. | 0.720 |
KXT69927.1 | gtfB | SCRDD08_00977 | SCRDD08_00785 | Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase. | Hypothetical protein; Required for polymorphic O-glycosylation of the serine-rich repeat protein in this bacteria. A stabilizing protein that is part of the accessory SecA2/SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. The GtfA-GtfB complex adds GlcNAc from UDP-GlcNAc to the substrate protein, attaching the first sugar residue. Stabilizes the glycosylation activity of GtfA. Has no N-acetylglucosaminyl transferase activity on its own. | 0.719 |
KXT70118.1 | KXT70222.1 | SCRDD08_00878 | SCRDD08_00772 | Glycosyltransferase LafB, responsible for the formation of Gal-Glc-DAG. | Accessory secretory protein Asp2. | 0.720 |
KXT70118.1 | KXT70223.1 | SCRDD08_00878 | SCRDD08_00773 | Glycosyltransferase LafB, responsible for the formation of Gal-Glc-DAG. | Accessory secretory protein Asp3. | 0.723 |
KXT70118.1 | gtfB | SCRDD08_00878 | SCRDD08_00785 | Glycosyltransferase LafB, responsible for the formation of Gal-Glc-DAG. | Hypothetical protein; Required for polymorphic O-glycosylation of the serine-rich repeat protein in this bacteria. A stabilizing protein that is part of the accessory SecA2/SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. The GtfA-GtfB complex adds GlcNAc from UDP-GlcNAc to the substrate protein, attaching the first sugar residue. Stabilizes the glycosylation activity of GtfA. Has no N-acetylglucosaminyl transferase activity on its own. | 0.741 |
KXT70219.1 | KXT70221.1 | SCRDD08_00769 | SCRDD08_00771 | Glycosyl transferase, family 8. | Accessory secretory protein Asp1. | 0.764 |
KXT70219.1 | KXT70222.1 | SCRDD08_00769 | SCRDD08_00772 | Glycosyl transferase, family 8. | Accessory secretory protein Asp2. | 0.672 |
page 1 of 4