Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KXT68519.1 | TrmE | SCRDD08_01921 | SCRDD08_01573 | GTP-binding protein YqeH, required for biogenesis of 30S ribosome subunit. | GTPase and tRNA-U34 5-formylation enzyme TrmE. | 0.769 |
| KXT68519.1 | dnaJ | SCRDD08_01921 | SCRDD08_01768 | GTP-binding protein YqeH, required for biogenesis of 30S ribosome subunit. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.727 |
| KXT68519.1 | engB | SCRDD08_01921 | SCRDD08_01463 | GTP-binding protein YqeH, required for biogenesis of 30S ribosome subunit. | GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.753 |
| KXT68519.1 | era | SCRDD08_01921 | SCRDD08_00821 | GTP-binding protein YqeH, required for biogenesis of 30S ribosome subunit. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.517 |
| KXT68519.1 | rplK | SCRDD08_01921 | SCRDD08_01703 | GTP-binding protein YqeH, required for biogenesis of 30S ribosome subunit. | LSU ribosomal protein L11p (L12e); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.713 |
| KXT68519.1 | rplO | SCRDD08_01921 | SCRDD08_02025 | GTP-binding protein YqeH, required for biogenesis of 30S ribosome subunit. | LSU ribosomal protein L15p (L27Ae); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.713 |
| KXT69001.1 | TrmE | SCRDD08_01574 | SCRDD08_01573 | Hypothetical protein. | GTPase and tRNA-U34 5-formylation enzyme TrmE. | 0.779 |
| TrmE | KXT68519.1 | SCRDD08_01573 | SCRDD08_01921 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | GTP-binding protein YqeH, required for biogenesis of 30S ribosome subunit. | 0.769 |
| TrmE | KXT69001.1 | SCRDD08_01573 | SCRDD08_01574 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | Hypothetical protein. | 0.779 |
| TrmE | dnaJ | SCRDD08_01573 | SCRDD08_01768 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.785 |
| TrmE | engB | SCRDD08_01573 | SCRDD08_01463 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.769 |
| TrmE | era | SCRDD08_01573 | SCRDD08_00821 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.756 |
| TrmE | mnmG | SCRDD08_01573 | SCRDD08_00040 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.932 |
| TrmE | rplK | SCRDD08_01573 | SCRDD08_01703 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | LSU ribosomal protein L11p (L12e); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.765 |
| TrmE | rplO | SCRDD08_01573 | SCRDD08_02025 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | LSU ribosomal protein L15p (L27Ae); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.763 |
| TrmE | rsmG | SCRDD08_01573 | SCRDD08_01931 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.846 |
| TrmE | thrS | SCRDD08_01573 | SCRDD08_00880 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | Threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). | 0.776 |
| dnaJ | KXT68519.1 | SCRDD08_01768 | SCRDD08_01921 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | GTP-binding protein YqeH, required for biogenesis of 30S ribosome subunit. | 0.727 |
| dnaJ | TrmE | SCRDD08_01768 | SCRDD08_01573 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | GTPase and tRNA-U34 5-formylation enzyme TrmE. | 0.785 |
| dnaJ | engB | SCRDD08_01768 | SCRDD08_01463 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.726 |
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