Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXT68579.1 | KXT68580.1 | SCRDD08_01784 | SCRDD08_01785 | Glutamate formiminotransferase / Glutamate formyltransferase. | Formiminotetrahydrofolate cyclodeaminase. | 0.994 |
KXT68579.1 | KXT68582.1 | SCRDD08_01784 | SCRDD08_01787 | Glutamate formiminotransferase / Glutamate formyltransferase. | Hypothetical protein. | 0.651 |
KXT68579.1 | fhs-2 | SCRDD08_01784 | SCRDD08_01786 | Glutamate formiminotransferase / Glutamate formyltransferase. | Formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. | 0.958 |
KXT68579.1 | hutG | SCRDD08_01784 | SCRDD08_01790 | Glutamate formiminotransferase / Glutamate formyltransferase. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.807 |
KXT68579.1 | hutH | SCRDD08_01784 | SCRDD08_01789 | Glutamate formiminotransferase / Glutamate formyltransferase. | Histidine ammonia-lyase. | 0.580 |
KXT68579.1 | hutI | SCRDD08_01784 | SCRDD08_01782 | Glutamate formiminotransferase / Glutamate formyltransferase. | Imidazolonepropionase. | 0.955 |
KXT68579.1 | hutU | SCRDD08_01784 | SCRDD08_01783 | Glutamate formiminotransferase / Glutamate formyltransferase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.761 |
KXT68579.1 | steT | SCRDD08_01784 | SCRDD08_01788 | Glutamate formiminotransferase / Glutamate formyltransferase. | Putative cationic amino acid transporter protein. | 0.449 |
KXT68580.1 | KXT68579.1 | SCRDD08_01785 | SCRDD08_01784 | Formiminotetrahydrofolate cyclodeaminase. | Glutamate formiminotransferase / Glutamate formyltransferase. | 0.994 |
KXT68580.1 | KXT68582.1 | SCRDD08_01785 | SCRDD08_01787 | Formiminotetrahydrofolate cyclodeaminase. | Hypothetical protein. | 0.597 |
KXT68580.1 | fhs-2 | SCRDD08_01785 | SCRDD08_01786 | Formiminotetrahydrofolate cyclodeaminase. | Formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. | 0.682 |
KXT68580.1 | hutH | SCRDD08_01785 | SCRDD08_01789 | Formiminotetrahydrofolate cyclodeaminase. | Histidine ammonia-lyase. | 0.724 |
KXT68580.1 | hutI | SCRDD08_01785 | SCRDD08_01782 | Formiminotetrahydrofolate cyclodeaminase. | Imidazolonepropionase. | 0.432 |
KXT68580.1 | hutU | SCRDD08_01785 | SCRDD08_01783 | Formiminotetrahydrofolate cyclodeaminase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.623 |
KXT68582.1 | KXT68579.1 | SCRDD08_01787 | SCRDD08_01784 | Hypothetical protein. | Glutamate formiminotransferase / Glutamate formyltransferase. | 0.651 |
KXT68582.1 | KXT68580.1 | SCRDD08_01787 | SCRDD08_01785 | Hypothetical protein. | Formiminotetrahydrofolate cyclodeaminase. | 0.597 |
KXT68582.1 | fhs-2 | SCRDD08_01787 | SCRDD08_01786 | Hypothetical protein. | Formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. | 0.641 |
KXT68582.1 | hutG | SCRDD08_01787 | SCRDD08_01790 | Hypothetical protein. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.558 |
KXT68582.1 | hutH | SCRDD08_01787 | SCRDD08_01789 | Hypothetical protein. | Histidine ammonia-lyase. | 0.763 |
KXT68582.1 | hutI | SCRDD08_01787 | SCRDD08_01782 | Hypothetical protein. | Imidazolonepropionase. | 0.654 |
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