Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXT68594.1 | KXT68595.1 | SCRDD08_01799 | SCRDD08_01800 | Alpha-galactosidase. | AraC family transcriptional regulator. | 0.695 |
KXT68595.1 | KXT68594.1 | SCRDD08_01800 | SCRDD08_01799 | AraC family transcriptional regulator. | Alpha-galactosidase. | 0.695 |
KXT68595.1 | KXT68713.1 | SCRDD08_01800 | SCRDD08_01739 | AraC family transcriptional regulator. | Transcriptional regulator, AraC family. | 0.460 |
KXT68595.1 | metF | SCRDD08_01800 | SCRDD08_01801 | AraC family transcriptional regulator. | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.531 |
KXT68595.1 | rpoA | SCRDD08_01800 | SCRDD08_02019 | AraC family transcriptional regulator. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.671 |
KXT68713.1 | KXT68595.1 | SCRDD08_01739 | SCRDD08_01800 | Transcriptional regulator, AraC family. | AraC family transcriptional regulator. | 0.460 |
KXT68713.1 | rpoA | SCRDD08_01739 | SCRDD08_02019 | Transcriptional regulator, AraC family. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.674 |
metF | KXT68595.1 | SCRDD08_01801 | SCRDD08_01800 | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | AraC family transcriptional regulator. | 0.531 |
rpoA | KXT68595.1 | SCRDD08_02019 | SCRDD08_01800 | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | AraC family transcriptional regulator. | 0.671 |
rpoA | KXT68713.1 | SCRDD08_02019 | SCRDD08_01739 | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcriptional regulator, AraC family. | 0.674 |