Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXT68613.1 | KXT68647.1 | SCRDD08_01818 | SCRDD08_01852 | Hypothetical protein. | Sensor-receptor histidine kinase NisK. | 0.824 |
KXT68647.1 | KXT68613.1 | SCRDD08_01852 | SCRDD08_01818 | Sensor-receptor histidine kinase NisK. | Hypothetical protein. | 0.824 |
KXT68647.1 | KXT68648.1 | SCRDD08_01852 | SCRDD08_01853 | Sensor-receptor histidine kinase NisK. | Hypothetical protein. | 0.975 |
KXT68647.1 | KXT68650.1 | SCRDD08_01852 | SCRDD08_01855 | Sensor-receptor histidine kinase NisK. | Hypothetical protein. | 0.802 |
KXT68647.1 | KXT68890.1 | SCRDD08_01852 | SCRDD08_01659 | Sensor-receptor histidine kinase NisK. | Two-component response regulator SA14-24. | 0.868 |
KXT68647.1 | KXT69058.1 | SCRDD08_01852 | SCRDD08_01486 | Sensor-receptor histidine kinase NisK. | Two-component system response regulator. | 0.881 |
KXT68647.1 | KXT69257.1 | SCRDD08_01852 | SCRDD08_01442 | Sensor-receptor histidine kinase NisK. | Two-component response regulator SA14-24. | 0.876 |
KXT68647.1 | KXT69536.1 | SCRDD08_01852 | SCRDD08_01273 | Sensor-receptor histidine kinase NisK. | Two component system response regulator CiaR. | 0.853 |
KXT68647.1 | KXT69567.1 | SCRDD08_01852 | SCRDD08_01212 | Sensor-receptor histidine kinase NisK. | Dihydrolipoamide dehydrogenase of acetoin dehydrogenase. | 0.944 |
KXT68647.1 | KXT70439.1 | SCRDD08_01852 | SCRDD08_00678 | Sensor-receptor histidine kinase NisK. | DNA-binding response regulator. | 0.821 |
KXT68647.1 | KXT70507.1 | SCRDD08_01852 | SCRDD08_00591 | Sensor-receptor histidine kinase NisK. | Two-component response regulator BceR. | 0.843 |
KXT68648.1 | KXT68647.1 | SCRDD08_01853 | SCRDD08_01852 | Hypothetical protein. | Sensor-receptor histidine kinase NisK. | 0.975 |
KXT68648.1 | KXT68650.1 | SCRDD08_01853 | SCRDD08_01855 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KXT68650.1 | KXT68647.1 | SCRDD08_01855 | SCRDD08_01852 | Hypothetical protein. | Sensor-receptor histidine kinase NisK. | 0.802 |
KXT68650.1 | KXT68648.1 | SCRDD08_01855 | SCRDD08_01853 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KXT68890.1 | KXT68647.1 | SCRDD08_01659 | SCRDD08_01852 | Two-component response regulator SA14-24. | Sensor-receptor histidine kinase NisK. | 0.868 |
KXT69058.1 | KXT68647.1 | SCRDD08_01486 | SCRDD08_01852 | Two-component system response regulator. | Sensor-receptor histidine kinase NisK. | 0.881 |
KXT69257.1 | KXT68647.1 | SCRDD08_01442 | SCRDD08_01852 | Two-component response regulator SA14-24. | Sensor-receptor histidine kinase NisK. | 0.876 |
KXT69536.1 | KXT68647.1 | SCRDD08_01273 | SCRDD08_01852 | Two component system response regulator CiaR. | Sensor-receptor histidine kinase NisK. | 0.853 |
KXT69567.1 | KXT68647.1 | SCRDD08_01212 | SCRDD08_01852 | Dihydrolipoamide dehydrogenase of acetoin dehydrogenase. | Sensor-receptor histidine kinase NisK. | 0.944 |
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