STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl37eRibosomal protein L37e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family. (60 aa)    
Predicted Functional Partners:
rpl31e
PFAM: Ribosomal protein L31e; KEGG: mhu:Mhun_3019 ribosomal protein L31e; Belongs to the eukaryotic ribosomal protein eL31 family.
   
 0.998
rpl30e
PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: mhu:Mhun_0054 ribosomal protein L7Ae/L30e/S12e/Gadd45; Belongs to the eukaryotic ribosomal protein eL30 family.
  
 0.997
rpl29
PFAM: ribosomal protein L29; KEGG: mhu:Mhun_2246 ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
 
 0.996
rpl24
Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
  
 0.996
rpl24e
Ribosomal protein L24E; Binds to the 23S rRNA.
 
 0.996
rps24e
KEGG: mma:MM0599 SSU ribosomal protein S24E; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.995
rpl23
Ribosomal protein L25/L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.
  
 0.995
rpl22
Ribosomal protein L22; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
  
 0.995
Mboo_0549
PFAM: Ribosomal protein L32e; KEGG: mhu:Mhun_2236 ribosomal protein L32e.
  
 0.995
rps28e
PFAM: Ribosomal protein S28e; KEGG: mhu:Mhun_1602 ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.
 
 
 0.995
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.