STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_0256KEGG: mhu:Mhun_2851 hypothetical protein. (215 aa)    
Predicted Functional Partners:
Mboo_0259
PFAM: SufBD protein; KEGG: mhu:Mhun_2849 SufBD.
       0.842
pcm
protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
       0.796
Mboo_0255
PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: mhu:Mhun_2852 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I.
       0.780
Mboo_0257
PFAM: cyclase family protein; KEGG: gme:Gmet_0042 putative cyclase.
       0.779
Mboo_0260
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mhu:Mhun_0461 ABC transporter related.
       0.775
glmS
Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
       0.718
Mboo_0253
PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: mhu:Mhun_2854 nucleotidyl transferase.
       0.718
Mboo_0254
PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: mhu:Mhun_2853 nucleotidyl transferase.
       0.718
Mboo_0251
PFAM: transferase hexapeptide repeat containing protein; KEGG: mhu:Mhun_2143 transferase hexapeptide repeat.
       0.616
Mboo_0250
PFAM: glycosyl transferase, group 1; KEGG: mtp:Mthe_1678 glycosyl transferase, group 1.
       0.503
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.