STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_0309KEGG: mhu:Mhun_1943 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; SMART: PAS domain containing protein. (657 aa)    
Predicted Functional Partners:
Mboo_2365
PFAM: response regulator receiver; KEGG: mhu:Mhun_1618 response regulator receiver domain protein (CheY-like).
 
 
 0.759
Mboo_1937
PFAM: response regulator receiver; KEGG: mhu:Mhun_1618 response regulator receiver domain protein (CheY-like).
 
 
 0.746
Mboo_1936
PFAM: response regulator receiver; KEGG: mhu:Mhun_1618 response regulator receiver domain protein (CheY-like).
 
 
 0.733
Mboo_2092
PFAM: response regulator receiver; KEGG: sfu:Sfum_0231 PAS/PAC sensor hybrid histidine kinase.
  
 
 0.676
Mboo_1120
PFAM: response regulator receiver; KEGG: ade:Adeh_0967 response regulator receiver domain protein (CheY-like).
 
 
 
 0.665
Mboo_1119
KEGG: swo:Swol_2132 bacteriophytochrome (light-regulated signal transduction histidine kinase)-like protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
   
 0.664
Mboo_1811
PFAM: response regulator receiver; KEGG: swo:Swol_2131 response regulator receiver protein.
 
 
 
 0.660
Mboo_1478
PFAM: response regulator receiver; KEGG: mhu:Mhun_1618 response regulator receiver domain protein (CheY-like).
  
     0.632
Mboo_0965
PFAM: response regulator receiver; KEGG: mhu:Mhun_1618 response regulator receiver domain protein (CheY-like).
  
     0.627
Mboo_1808
KEGG: mth:MTH457 sensory transduction regulatory protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.588
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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