STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_0435PFAM: nitrogen regulatory protein P-II; KEGG: mtp:Mthe_0085 nitrogen regulatory protein P-II. (112 aa)    
Predicted Functional Partners:
Mboo_1686
TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mhu:Mhun_2504 ammonium transporter.
  
 
 0.897
Mboo_1688
TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mtp:Mthe_0084 ammonium transporter.
  
 
 0.897
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
   
 
 0.756
Mboo_0067
PFAM: ADP-ribosylation/Crystallin J1; KEGG: afu:AF1724 dinitrogenase reductase activating glycohydrolase.
   
 
 0.589
Mboo_1958
PFAM: ADP-ribosylation/Crystallin J1; KEGG: nph:NP3878A probable ADP-ribosylglycohydrolase.
   
 
 0.589
Mboo_0434
PFAM: protein of unknown function RIO1; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: lbu:LBUL_1306 serine/threonine protein kinase with beta-lactam (PASTA) domains.
     
 0.562
Mboo_0437
PFAM: nitrogen regulatory protein P-II; KEGG: mth:MTH1561 nitrogen fixation nifhd region glnb-like protein 1.
 
   
0.562
Mboo_0795
Putative PAS/PAC sensor protein; KEGG: mhu:Mhun_1353 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: TPR repeat-containing protein; response regulator receiver; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
   
 
 0.509
Mboo_1949
Putative PAS/PAC sensor protein; KEGG: mhu:Mhun_1353 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: TPR repeat-containing protein; response regulator receiver; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
   
 
 0.509
Mboo_0436
PFAM: nitrogen regulatory protein P-II; KEGG: mac:MA1211 P-II family nitrogen regulatory protein; Belongs to the P(II) protein family.
 
    
0.504
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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