STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_0467KEGG: mhu:Mhun_1739 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (431 aa)    
Predicted Functional Partners:
Mboo_1622
KEGG: mhu:Mhun_1267 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.687
Mboo_1811
PFAM: response regulator receiver; KEGG: swo:Swol_2131 response regulator receiver protein.
 
 
 
 0.602
Mboo_1107
KEGG: mhu:Mhun_0440 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
     0.593
Mboo_2365
PFAM: response regulator receiver; KEGG: mhu:Mhun_1618 response regulator receiver domain protein (CheY-like).
 
 
 0.561
Mboo_1809
Putative PAS/PAC sensor protein; KEGG: gsu:GSU1414 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
     0.552
Mboo_1245
KEGG: mhu:Mhun_1267 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
     0.541
Mboo_2032
PFAM: TPR repeat-containing protein; response regulator receiver; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mma:MM2516 putative transcriptional regulator.
 
 
 
 0.537
Mboo_1936
PFAM: response regulator receiver; KEGG: mhu:Mhun_1618 response regulator receiver domain protein (CheY-like).
 
 
 0.525
Mboo_2016
Putative PAS/PAC sensor protein; KEGG: tbd:Tbd_2634 putative diguanylate cyclase (GGDEF domain); TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
     0.516
Mboo_1119
KEGG: swo:Swol_2132 bacteriophytochrome (light-regulated signal transduction histidine kinase)-like protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
     0.513
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.