STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_0610PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mac:MA0616 2-cys peroxiredoxin, subunit A. (162 aa)    
Predicted Functional Partners:
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.841
Mboo_0073
PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: mhu:Mhun_3231 cytochrome c biogenesis protein, transmembrane region.
  
  
 0.644
Mboo_0609
PFAM: Mg2+ transporter protein, CorA family protein; KEGG: cac:CAC1852 magnesium and cobalt transport protein.
  
    0.616
msrB
TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: sfu:Sfum_2571 methionine-R-sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
  
  
 0.594
Mboo_0084
Glutaredoxin; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutaredoxin; KEGG: mhu:Mhun_3049 glutaredoxin.
  
  
 0.569
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.527
Mboo_0978
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gsu:GSU0487 cation efflux family protein.
 
   
 0.519
Mboo_2086
PFAM: beta-lactamase domain protein; KEGG: mhu:Mhun_0795 beta-lactamase-like.
 
   
 0.499
Mboo_1090
PFAM: chaperonin Cpn10; KEGG: mac:MA0630 groES protein (Cpn10); Belongs to the GroES chaperonin family.
  
  
 0.471
Mboo_0794
PFAM: Ferritin, Dps family protein; KEGG: tko:TK1999 ferritin-like protein.
     
 0.459
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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